Bioconductor Nested design

Showing : Nested design • reset

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1.6k

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multifactor nested design deseq2

7.7 years ago • updated 7.6 years ago swaegers.janne • 0

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1.5k

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edger multifactor nested design

7.8 years ago • updated 7.7 years ago swaegers.janne • 0

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1.7k

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deseq2 interaction model nested design

7.2 years ago • updated 7.1 years ago glocke01 ▴ 10

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2.5k

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edger differential gene expression without replicate nested design help

updated 7.9 years ago by Aaron Lun ★ 28k • written 7.9 years ago by knipehf • 0

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1.3k

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edgeR model.matrix nested design reference group

updated 6.1 years ago by Aaron Lun ★ 28k • written 6.1 years ago by ri.lars ▴ 40

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1.2k

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edgeR nested design differential expression

updated 6.0 years ago by Gordon Smyth 50k • written 6.1 years ago by chiayi • 0

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1.4k

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edgeR removeBatchEffect nested design

updated 7.6 years ago by Aaron Lun ★ 28k • written 7.6 years ago by Jenny Drnevich ★ 2.0k

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2.2k

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deseq2 nested design

updated 5.8 years ago by Michael Love 42k • written 5.8 years ago by xie186 • 0

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4.6k

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deseq2 multiple factor design nested design interaction term

updated 7.0 years ago by Michael Love 42k • written 7.0 years ago by zahra.aboukhalil • 0

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977

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deseq2 multiple factor design nested design

6.3 years ago michael.steffen ▴ 20

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1.2k

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deseq2 nested design

updated 5.7 years ago by Michael Love 42k • written 5.7 years ago by katarina.truve • 0

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1.0k

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limma edger nested design

updated 7.7 years ago by Ryan C. Thompson ★ 7.9k • written 7.7 years ago by xluong • 0

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1.1k

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nested design post hoc edgeR

updated 5.9 years ago by Aaron Lun ★ 28k • written 5.9 years ago by ashley.lu • 0

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1.2k

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edger nested design rnaseq

updated 8.9 years ago by Ryan C. Thompson ★ 7.9k • written 8.9 years ago by mrwarner09 • 0

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2.4k

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deseq2 Nested design random variable

updated 9.0 years ago by Michael Love 42k • written 9.0 years ago by Silva • 0

15 results • Page 1 of 1

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Comment: error running enricher from clusterprofiler by Yael • 0

It worked!!! Thanks alot, i think something in the gene_list wasnt right... Thanks agian

Comment: Create protein sequences including variants from a VCF file by Yun • 0

This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object

Comment: Can log2cpm be used for proteomics data normalization? by Daniel • 0

Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10

I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10

Thanks again Guido, I will try to run the script you have suggested and see if I can install the package. Yes, I have seen this message a…

Votes

Answer: Trim/Filter out-of-bounds GRanges

Comment: How to correctly adjust for gender in edgeR

Create protein sequences including variants from a VCF file

A: DEXSeq design formula

Answer: SGSeq: moving toward diffex from SGSeq analysis

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Popular Question to Vincent J. Carey, Jr. 6.7k